Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NlkO54949 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.66□□□□□ -0.38
NlkO54949 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.66□□□□□ -0.38
NlkO54949 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NlkO54949 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NlkO54949 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
NlkO54949 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.65□□□□□ -0.38
NlkO54949 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.65□□□□□ -0.38
NlkO54949 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.65□□□□□ -0.38
NlkO54949 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.65□□□□□ -0.38
NlkO54949 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NlkO54949 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NlkO54949 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
NlkO54949 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NlkO54949 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
NlkO54949 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NlkO54949 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NlkO54949 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.39
NlkO54949 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
NlkO54949 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
NlkO54949 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.64□□□□□ -0.39
NlkO54949 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NlkO54949 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NlkO54949 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.64□□□□□ -0.39
NlkO54949 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.64□□□□□ -0.39
NlkO54949 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm18246-201ENSMUST00000221023 728 ntBASIC12.64□□□□□ -0.39
NlkO54949 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.64□□□□□ -0.39
NlkO54949 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NlkO54949 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.64□□□□□ -0.39
NlkO54949 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.64□□□□□ -0.39
NlkO54949 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NlkO54949 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 232.8 ms