Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a4O35874 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc1a4O35874 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc1a4O35874 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc1a4O35874 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc1a4O35874 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.6■□□□□ 0.25
Slc1a4O35874 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Slc1a4O35874 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Gm44608-201ENSMUST00000206827 855 ntBASIC16.6■□□□□ 0.25
Slc1a4O35874 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc1a4O35874 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Slc1a4O35874 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc1a4O35874 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.59■□□□□ 0.25
Slc1a4O35874 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.59■□□□□ 0.25
Slc1a4O35874 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.59■□□□□ 0.25
Slc1a4O35874 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Gm16215-201ENSMUST00000161990 637 ntBASIC16.59■□□□□ 0.25
Slc1a4O35874 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Gm29667-201ENSMUST00000190817 490 ntBASIC16.59■□□□□ 0.25
Slc1a4O35874 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc1a4O35874 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc1a4O35874 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc1a4O35874 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc1a4O35874 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc1a4O35874 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc1a4O35874 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm15393-201ENSMUST00000120499 219 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm5866-201ENSMUST00000177881 973 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm24694-201ENSMUST00000180054 110 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm27663-201ENSMUST00000184839 110 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm7063-201ENSMUST00000186840 981 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm7730-201ENSMUST00000212486 454 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Slc1a4O35874 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Slc1a4O35874 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.58■□□□□ 0.24
Slc1a4O35874 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc1a4O35874 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Slc1a4O35874 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Slc1a4O35874 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc1a4O35874 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc1a4O35874 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.57■□□□□ 0.24
Slc1a4O35874 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.57■□□□□ 0.24
Slc1a4O35874 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc1a4O35874 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc1a4O35874 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc1a4O35874 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc1a4O35874 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc1a4O35874 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.57■□□□□ 0.24
Slc1a4O35874 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc1a4O35874 Gm12585-201ENSMUST00000117307 290 ntBASIC16.57■□□□□ 0.24
Slc1a4O35874 Gm15321-201ENSMUST00000121290 288 ntBASIC16.57■□□□□ 0.24
Slc1a4O35874 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms