Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.3□□□□□ -0.12
Phox2bO35690 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.3□□□□□ -0.12
Phox2bO35690 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phox2bO35690 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Phox2bO35690 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.29□□□□□ -0.12
Phox2bO35690 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.29□□□□□ -0.12
Phox2bO35690 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.29□□□□□ -0.12
Phox2bO35690 Gm18054-201ENSMUST00000207539 555 ntBASIC14.29□□□□□ -0.12
Phox2bO35690 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Gm9229-201ENSMUST00000222777 126 ntBASIC14.29□□□□□ -0.12
Phox2bO35690 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Phox2bO35690 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Phox2bO35690 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Phox2bO35690 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Phox2bO35690 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phox2bO35690 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Phox2bO35690 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.28□□□□□ -0.12
Phox2bO35690 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Phox2bO35690 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.28□□□□□ -0.12
Phox2bO35690 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC14.28□□□□□ -0.12
Phox2bO35690 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Gm27486-201ENSMUST00000184923 80 ntBASIC14.28□□□□□ -0.12
Phox2bO35690 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.28□□□□□ -0.12
Phox2bO35690 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.28□□□□□ -0.12
Phox2bO35690 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Phox2bO35690 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Phox2bO35690 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Phox2bO35690 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Phox2bO35690 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Phox2bO35690 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Phox2bO35690 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.27□□□□□ -0.12
Phox2bO35690 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Phox2bO35690 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Phox2bO35690 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Phox2bO35690 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms