Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col15a1O35206 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.92■□□□□ 0.46
Col15a1O35206 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.92■□□□□ 0.46
Col15a1O35206 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Col15a1O35206 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.92■□□□□ 0.46
Col15a1O35206 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Col15a1O35206 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.92■□□□□ 0.46
Col15a1O35206 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.92■□□□□ 0.46
Col15a1O35206 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.92■□□□□ 0.46
Col15a1O35206 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col15a1O35206 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.91■□□□□ 0.46
Col15a1O35206 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Gm19184-201ENSMUST00000196798 928 ntBASIC17.91■□□□□ 0.46
Col15a1O35206 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.91■□□□□ 0.46
Col15a1O35206 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.91■□□□□ 0.46
Col15a1O35206 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.91■□□□□ 0.46
Col15a1O35206 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Col15a1O35206 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col15a1O35206 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.91■□□□□ 0.46
Col15a1O35206 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.91■□□□□ 0.46
Col15a1O35206 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.91■□□□□ 0.46
Col15a1O35206 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col15a1O35206 Gm45930-201ENSMUST00000221330 292 ntBASIC17.91■□□□□ 0.46
Col15a1O35206 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col15a1O35206 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col15a1O35206 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col15a1O35206 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col15a1O35206 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.9■□□□□ 0.46
Col15a1O35206 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col15a1O35206 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col15a1O35206 Gm4271-201ENSMUST00000174444 973 ntBASIC17.9■□□□□ 0.46
Col15a1O35206 Gm6013-201ENSMUST00000212264 699 ntBASIC17.9■□□□□ 0.46
Col15a1O35206 Gm45880-201ENSMUST00000213041 853 ntBASIC17.9■□□□□ 0.46
Col15a1O35206 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.9■□□□□ 0.46
Col15a1O35206 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col15a1O35206 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.9■□□□□ 0.46
Col15a1O35206 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col15a1O35206 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.89■□□□□ 0.46
Col15a1O35206 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col15a1O35206 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.89■□□□□ 0.45
Col15a1O35206 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col15a1O35206 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.89■□□□□ 0.45
Col15a1O35206 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col15a1O35206 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col15a1O35206 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms