Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.62□□□□□ -0.39
Alx4O35137 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Alx4O35137 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx4O35137 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx4O35137 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
Alx4O35137 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Alx4O35137 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.61□□□□□ -0.39
Alx4O35137 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.61□□□□□ -0.39
Alx4O35137 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.61□□□□□ -0.39
Alx4O35137 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.61□□□□□ -0.39
Alx4O35137 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Alx4O35137 Gm9385-201ENSMUST00000117563 472 ntBASIC12.61□□□□□ -0.39
Alx4O35137 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.61□□□□□ -0.39
Alx4O35137 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.61□□□□□ -0.39
Alx4O35137 Gm15483-201ENSMUST00000120338 456 ntBASIC12.61□□□□□ -0.39
Alx4O35137 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Mir5126-201ENSMUST00000175513 77 ntBASIC12.61□□□□□ -0.39
Alx4O35137 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Alx4O35137 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.61□□□□□ -0.39
Alx4O35137 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Alx4O35137 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Alx4O35137 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Alx4O35137 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.6□□□□□ -0.39
Alx4O35137 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Alx4O35137 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.6□□□□□ -0.39
Alx4O35137 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.6□□□□□ -0.39
Alx4O35137 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Gm27920-201ENSMUST00000183953 96 ntBASIC12.6□□□□□ -0.39
Alx4O35137 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.6□□□□□ -0.39
Alx4O35137 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Alx4O35137 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Alx4O35137 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.6□□□□□ -0.39
Alx4O35137 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Alx4O35137 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Alx4O35137 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.59□□□□□ -0.39
Alx4O35137 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Mir8098-201ENSMUST00000184011 137 ntBASIC12.59□□□□□ -0.39
Alx4O35137 Gm27741-201ENSMUST00000185060 237 ntBASIC12.59□□□□□ -0.39
Alx4O35137 Gm17971-201ENSMUST00000190239 806 ntBASIC12.59□□□□□ -0.39
Alx4O35137 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.59□□□□□ -0.39
Alx4O35137 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms