Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.7□□□□□ -0.06
Ebf3O08791 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.7□□□□□ -0.06
Ebf3O08791 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ebf3O08791 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ebf3O08791 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.7□□□□□ -0.06
Ebf3O08791 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Gm45384-201ENSMUST00000210451 277 ntBASIC14.7□□□□□ -0.06
Ebf3O08791 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.7□□□□□ -0.06
Ebf3O08791 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Ebf3O08791 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ebf3O08791 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf3O08791 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ebf3O08791 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ebf3O08791 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ebf3O08791 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.69□□□□□ -0.06
Ebf3O08791 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.69□□□□□ -0.06
Ebf3O08791 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.69□□□□□ -0.06
Ebf3O08791 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.69□□□□□ -0.06
Ebf3O08791 Gm9908-201ENSMUST00000211534 448 ntBASIC14.69□□□□□ -0.06
Ebf3O08791 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Gm9797-201ENSMUST00000052902 613 ntBASIC14.69□□□□□ -0.06
Ebf3O08791 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ebf3O08791 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf3O08791 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ebf3O08791 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.69□□□□□ -0.06
Ebf3O08791 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf3O08791 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ebf3O08791 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.68□□□□□ -0.06
Ebf3O08791 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.68□□□□□ -0.06
Ebf3O08791 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ebf3O08791 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ebf3O08791 Gm28760-201ENSMUST00000185995 736 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Gm10766-202ENSMUST00000194123 606 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Gm37917-201ENSMUST00000194711 392 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Gm43433-201ENSMUST00000196573 481 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ebf3O08791 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.68□□□□□ -0.06
Ebf3O08791 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.68□□□□□ -0.06
Ebf3O08791 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms