Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcof1O08784 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcof1O08784 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcof1O08784 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.52■□□□□ 0.24
Tcof1O08784 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Tcof1O08784 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcof1O08784 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tcof1O08784 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Tcof1O08784 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Gm22189-201ENSMUST00000103822 86 ntBASIC16.51■□□□□ 0.23
Tcof1O08784 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Tcof1O08784 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.51■□□□□ 0.23
Tcof1O08784 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Tcof1O08784 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.51■□□□□ 0.23
Tcof1O08784 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.51■□□□□ 0.23
Tcof1O08784 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tcof1O08784 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.51■□□□□ 0.23
Tcof1O08784 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tcof1O08784 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.51■□□□□ 0.23
Tcof1O08784 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tcof1O08784 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Tcof1O08784 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Syt7-205ENSMUST00000224135 1557 ntBASIC16.51■□□□□ 0.23
Tcof1O08784 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcof1O08784 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tcof1O08784 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tcof1O08784 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.5■□□□□ 0.23
Tcof1O08784 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.5■□□□□ 0.23
Tcof1O08784 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.5■□□□□ 0.23
Tcof1O08784 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.5■□□□□ 0.23
Tcof1O08784 Gm6218-201ENSMUST00000219812 628 ntBASIC16.5■□□□□ 0.23
Tcof1O08784 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Tcof1O08784 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.5■□□□□ 0.23
Tcof1O08784 Gm20445-201ENSMUST00000061905 565 ntBASIC16.5■□□□□ 0.23
Tcof1O08784 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.5■□□□□ 0.23
Tcof1O08784 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.5■□□□□ 0.23
Tcof1O08784 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.5■□□□□ 0.23
Tcof1O08784 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Tcof1O08784 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tcof1O08784 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tcof1O08784 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcof1O08784 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Tcof1O08784 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.49■□□□□ 0.23
Tcof1O08784 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Tcof1O08784 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.49■□□□□ 0.23
Tcof1O08784 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.49■□□□□ 0.23
Tcof1O08784 Gm21854-201ENSMUST00000179901 471 ntBASIC16.49■□□□□ 0.23
Tcof1O08784 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.49■□□□□ 0.23
Tcof1O08784 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Tcof1O08784 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.49■□□□□ 0.23
Tcof1O08784 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Tcof1O08784 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tcof1O08784 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Tcof1O08784 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms