Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm13123-201ENSMUST00000122173 492 ntBASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm27572-201ENSMUST00000183702 255 ntBASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Gm44064-201ENSMUST00000204964 1087 ntBASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcf11G3X9Z4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Gm15544-201ENSMUST00000118776 1531 ntBASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Gm18630-201ENSMUST00000222109 1397 ntBASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Gm5370-201ENSMUST00000187187 574 ntBASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Gm3695-201ENSMUST00000087222 1009 ntBASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcf11G3X9Z4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcf11G3X9Z4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Gm15889-202ENSMUST00000212669 2443 ntBASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Gm11661-201ENSMUST00000121761 1327 ntBASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Gm38319-201ENSMUST00000194537 1266 ntBASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Rassf8-202ENSMUST00000058538 1131 ntBASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcf11G3X9Z4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Itm2b-204ENSMUST00000228637 783 ntBASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcf11G3X9Z4 Mir686-201ENSMUST00000102174 109 ntBASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Gm11618-201ENSMUST00000117946 267 ntBASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Gm29649-201ENSMUST00000185649 419 ntBASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC21.02■□□□□ 0.95
Pcf11G3X9Z4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcf11G3X9Z4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms