Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 AA543401-201ENSMUST00000164248 1269 ntBASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.18■□□□□ 0.02
Chrna9G3X8Z7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gm16476-201ENSMUST00000221544 139 ntBASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Dupd1-202ENSMUST00000224735 548 ntBASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chrna9G3X8Z7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Gm11594-201ENSMUST00000122313 162 ntBASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chrna9G3X8Z7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms