Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc188F6WEU2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Gm44967-201ENSMUST00000207047 631 ntBASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc188F6WEU2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm14665-201ENSMUST00000122294 557 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm13570-201ENSMUST00000140763 309 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm45770-201ENSMUST00000212105 616 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc188F6WEU2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm11222-201ENSMUST00000119005 738 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm9550-201ENSMUST00000161130 862 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm28450-201ENSMUST00000187349 638 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms