Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gm13453-201ENSMUST00000118708 357 ntBASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gm44344-201ENSMUST00000200287 129 ntBASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4lE9Q2N0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Gm14767-201ENSMUST00000121559 586 ntBASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Gm27680-201ENSMUST00000184192 160 ntBASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cpsf4lE9Q2N0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4lE9Q2N0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Gm33320-201ENSMUST00000192232 530 ntBASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Gm44872-201ENSMUST00000207864 420 ntBASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Gm9229-201ENSMUST00000222777 126 ntBASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4lE9Q2N0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms