Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh17E9PXF0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms