Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.35□□□□□ -0.43
Rd3lB2RV38 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.35□□□□□ -0.43
Rd3lB2RV38 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rd3lB2RV38 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gm12350-201ENSMUST00000121208 462 ntBASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gm13597-201ENSMUST00000121239 375 ntBASIC12.34□□□□□ -0.43
Rd3lB2RV38 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.34□□□□□ -0.43
Rd3lB2RV38 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rd3lB2RV38 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm12008-201ENSMUST00000117791 755 ntBASIC12.33□□□□□ -0.44
Rd3lB2RV38 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.33□□□□□ -0.44
Rd3lB2RV38 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm27741-201ENSMUST00000185060 237 ntBASIC12.33□□□□□ -0.44
Rd3lB2RV38 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rd3lB2RV38 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms