Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a6B1AVK5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Gm45865-201ENSMUST00000211815 945 ntBASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Gm10268-201ENSMUST00000085340 555 ntBASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.26□□□□□ -0.13
Col4a6B1AVK5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Gm29199-201ENSMUST00000187766 775 ntBASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a6B1AVK5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Gm44364-201ENSMUST00000198368 141 ntBASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a6B1AVK5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm16479-201ENSMUST00000121706 932 ntBASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm18935-201ENSMUST00000212692 664 ntBASIC14.24□□□□□ -0.13
Col4a6B1AVK5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms