Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Matn2-206ENSMUST00000228570 2798 ntBASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm16198-201ENSMUST00000118766 670 ntBASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm12626-201ENSMUST00000117339 1983 ntBASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm12623-201ENSMUST00000119849 1983 ntBASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm6198-201ENSMUST00000191337 2929 ntBASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm2420-202ENSMUST00000202224 2249 ntBASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm1401-201ENSMUST00000122048 772 ntBASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ighv1-11A0A0A6YWI9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms