Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm25086-201ENSMUST00000179931 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm23243-201ENSMUST00000180047 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24659-201ENSMUST00000180212 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm24169-201ENSMUST00000180244 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm23689-201ENSMUST00000180354 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm27359-201ENSMUST00000184153 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm27785-201ENSMUST00000184268 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm27466-201ENSMUST00000184396 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm27703-201ENSMUST00000184836 110 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb2S4R1M3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 BC001981-202ENSMUST00000191393 1545 ntBASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm6736-201ENSMUST00000166583 948 ntBASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb2S4R1M3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm27702-201ENSMUST00000184512 56 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm18766-201ENSMUST00000189811 808 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm29541-201ENSMUST00000191351 678 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms