Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Crlf3Q9Z2L7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Gm8584-201ENSMUST00000171982 758 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Crlf3Q9Z2L7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Gm5867-201ENSMUST00000063197 592 ntBASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.32□□□□□ -0.12
Crlf3Q9Z2L7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.31□□□□□ -0.12
Crlf3Q9Z2L7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms