Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.66□□□□□ -0.06
Smarcb1Q9Z0H3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Gm13385-201ENSMUST00000121089 220 ntBASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smarcb1Q9Z0H3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Gm27772-201ENSMUST00000184900 187 ntBASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcb1Q9Z0H3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcb1Q9Z0H3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms