Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 AA914427-201ENSMUST00000193194 1166 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm23270-201ENSMUST00000104055 131 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a4Q9QZR9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gm11331-201ENSMUST00000119764 288 ntBASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gm28693-202ENSMUST00000190758 331 ntBASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a4Q9QZR9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a4Q9QZR9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a4Q9QZR9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Col4a4Q9QZR9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms