Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crlf1Q9JM58 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm15376-201ENSMUST00000122258 783 ntBASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crlf1Q9JM58 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Mir7070-201ENSMUST00000183657 86 ntBASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Gm37008-201ENSMUST00000195712 319 ntBASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Prob1-201ENSMUST00000097619 3021 ntBASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf1Q9JM58 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms