Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco4Q9JIS3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm7370-201ENSMUST00000219471 767 ntBASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco4Q9JIS3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.32□□□□□ -0.6
Smco4Q9JIS3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gm16061-201ENSMUST00000122167 857 ntBASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.31□□□□□ -0.6
Smco4Q9JIS3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco4Q9JIS3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms