Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2aQ9DB34 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 AA543401-201ENSMUST00000164248 1269 ntBASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Gm10275-202ENSMUST00000168697 495 ntBASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Gm27618-201ENSMUST00000183671 60 ntBASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Gm27631-201ENSMUST00000184163 466 ntBASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Gm10275-201ENSMUST00000092620 635 ntBASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2aQ9DB34 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Gm15693-201ENSMUST00000120470 637 ntBASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Gm27622-201ENSMUST00000183779 60 ntBASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Gm28630-201ENSMUST00000187806 498 ntBASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2aQ9DB34 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm24543-201ENSMUST00000103867 82 ntBASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm5566-201ENSMUST00000116118 459 ntBASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm6888-201ENSMUST00000221983 706 ntBASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2aQ9DB34 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp2aQ9DB34 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2aQ9DB34 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2aQ9DB34 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2aQ9DB34 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2aQ9DB34 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2aQ9DB34 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms