Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.61■□□□□ 0.57
U2af1Q9D883 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
U2af1Q9D883 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
U2af1Q9D883 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1Q9D883 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.6■□□□□ 0.57
U2af1Q9D883 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Gm7063-201ENSMUST00000186840 981 ntBASIC18.6■□□□□ 0.57
U2af1Q9D883 Gm37714-201ENSMUST00000194742 342 ntBASIC18.6■□□□□ 0.57
U2af1Q9D883 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Gm6218-201ENSMUST00000219812 628 ntBASIC18.6■□□□□ 0.57
U2af1Q9D883 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
U2af1Q9D883 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
U2af1Q9D883 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.59■□□□□ 0.57
U2af1Q9D883 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
U2af1Q9D883 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
U2af1Q9D883 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.58■□□□□ 0.57
U2af1Q9D883 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
U2af1Q9D883 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
U2af1Q9D883 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
U2af1Q9D883 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
U2af1Q9D883 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
U2af1Q9D883 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
U2af1Q9D883 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.58■□□□□ 0.56
U2af1Q9D883 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
U2af1Q9D883 Gm18027-201ENSMUST00000218947 619 ntBASIC18.58■□□□□ 0.56
U2af1Q9D883 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
U2af1Q9D883 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
U2af1Q9D883 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
U2af1Q9D883 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.57■□□□□ 0.56
U2af1Q9D883 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms