Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem54Q9D7S1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Gm27306-201ENSMUST00000183970 107 ntBASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Gm27321-201ENSMUST00000185021 205 ntBASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Gm9229-201ENSMUST00000222777 126 ntBASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem54Q9D7S1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Gm9063-201ENSMUST00000223299 582 ntBASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tmem54Q9D7S1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tmem54Q9D7S1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.4□□□□□ -0.43
Tmem54Q9D7S1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Tmem54Q9D7S1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms