Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Gm25287-201ENSMUST00000103846 110 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Gm22918-201ENSMUST00000103855 110 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Gm13365-201ENSMUST00000121188 973 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Gm27631-201ENSMUST00000184163 466 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc7Q9D541 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm18049-201ENSMUST00000208909 581 ntBASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.53■□□□□ 0.24
Ccdc7Q9D541 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc7Q9D541 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc7Q9D541 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc7Q9D541 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Mir1895-201ENSMUST00000122615 79 ntBASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 AA543401-201ENSMUST00000164248 1269 ntBASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Gm18766-201ENSMUST00000189811 808 ntBASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc7Q9D541 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms