Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm28911-201ENSMUST00000188837 117 ntBASIC16.82■□□□□ 0.28
Stag1Q9D3E6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm18027-201ENSMUST00000218947 619 ntBASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag1Q9D3E6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Gm15240-201ENSMUST00000118156 720 ntBASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Gm9002-201ENSMUST00000178437 499 ntBASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Stag1Q9D3E6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Stag1Q9D3E6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Gm18307-201ENSMUST00000206864 949 ntBASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag1Q9D3E6 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.79■□□□□ 0.28
Stag1Q9D3E6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms