Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm20553-201ENSMUST00000204205 844 ntBASIC16.65■□□□□ 0.26
Smc3Q9CW03 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc3Q9CW03 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smc3Q9CW03 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Smc3Q9CW03 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Smc3Q9CW03 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smc3Q9CW03 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Gm12260-201ENSMUST00000122447 411 ntBASIC16.64■□□□□ 0.25
Smc3Q9CW03 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.64■□□□□ 0.25
Smc3Q9CW03 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Mir8117-201ENSMUST00000184773 107 ntBASIC16.64■□□□□ 0.25
Smc3Q9CW03 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.64■□□□□ 0.25
Smc3Q9CW03 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc3Q9CW03 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.63■□□□□ 0.25
Smc3Q9CW03 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.63■□□□□ 0.25
Smc3Q9CW03 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc3Q9CW03 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.62■□□□□ 0.25
Smc3Q9CW03 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.62■□□□□ 0.25
Smc3Q9CW03 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms