Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ska1Q9CPV1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ska1Q9CPV1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.36□□□□□ -0.27
Ska1Q9CPV1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms