Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Gm1401-201ENSMUST00000122048 772 ntBASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Gm9385-201ENSMUST00000117563 472 ntBASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim8Q99PJ2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm8584-201ENSMUST00000171982 758 ntBASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm27525-201ENSMUST00000184465 107 ntBASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim8Q99PJ2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms