Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx6-1Q99MA9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Prob1-201ENSMUST00000097619 3021 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm29127-201ENSMUST00000188304 517 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm43094-201ENSMUST00000196549 921 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gm7399-201ENSMUST00000032395 858 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx6-1Q99MA9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms