Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Rps4l-201ENSMUST00000071745 943 ntBASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cttnbp2nlQ99LJ0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cttnbp2nlQ99LJ0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cttnbp2nlQ99LJ0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
Cttnbp2nlQ99LJ0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cttnbp2nlQ99LJ0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cttnbp2nlQ99LJ0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cttnbp2nlQ99LJ0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cttnbp2nlQ99LJ0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cttnbp2nlQ99LJ0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms