Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Gm9257-201ENSMUST00000221254 232 ntBASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf1Q99LC2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Gm27731-201ENSMUST00000185192 107 ntBASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf1Q99LC2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gm43179-201ENSMUST00000198797 275 ntBASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.12□□□□□ -0.15
Cstf1Q99LC2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Gm14660-201ENSMUST00000119809 575 ntBASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cstf1Q99LC2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms