Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk9Q99J95 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.27□□□□□ -0.12
Cdk9Q99J95 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk9Q99J95 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm5682-201ENSMUST00000173402 505 ntBASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm18733-201ENSMUST00000173950 856 ntBASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdk9Q99J95 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdk9Q99J95 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.27□□□□□ -0.13
Cdk9Q99J95 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.27□□□□□ -0.13
Cdk9Q99J95 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk9Q99J95 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Gm10060-201ENSMUST00000212002 111 ntBASIC14.26□□□□□ -0.13
Cdk9Q99J95 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk9Q99J95 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk9Q99J95 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms