Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb6Q91XZ4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Gm27622-201ENSMUST00000183779 60 ntBASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb6Q91XZ4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhb6Q91XZ4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms