Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga11Q91XY8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhga11Q91XY8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhga11Q91XY8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga11Q91XY8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga11Q91XY8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhga11Q91XY8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhga11Q91XY8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Gm11025-201ENSMUST00000140773 466 ntBASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhga11Q91XY8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms