Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trex1Q91XB0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.16■□□□□ 0.18
Trex1Q91XB0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.16■□□□□ 0.18
Trex1Q91XB0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.16■□□□□ 0.18
Trex1Q91XB0 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.16■□□□□ 0.18
Trex1Q91XB0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trex1Q91XB0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm24420-201ENSMUST00000176676 59 ntBASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.15■□□□□ 0.18
Trex1Q91XB0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trex1Q91XB0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trex1Q91XB0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trex1Q91XB0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trex1Q91XB0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Gm4984-201ENSMUST00000115987 360 ntBASIC16.14■□□□□ 0.17
Trex1Q91XB0 Gm11425-201ENSMUST00000119608 498 ntBASIC16.14■□□□□ 0.17
Trex1Q91XB0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Gm9396-201ENSMUST00000076703 567 ntBASIC16.14■□□□□ 0.17
Trex1Q91XB0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trex1Q91XB0 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.14■□□□□ 0.17
Trex1Q91XB0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.13■□□□□ 0.17
Trex1Q91XB0 Mir1894-201ENSMUST00000122802 81 ntBASIC16.13■□□□□ 0.17
Trex1Q91XB0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms