Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rpa1Q8VEE4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gm44882-201ENSMUST00000205702 802 ntBASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpa1Q8VEE4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gm17971-201ENSMUST00000190239 806 ntBASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpa1Q8VEE4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms