Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgms1Q8VCQ6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgms1Q8VCQ6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Gm25948-201ENSMUST00000175334 112 ntBASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.28■□□□□ 0.04
Sgms1Q8VCQ6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Mir449b-201ENSMUST00000104833 80 ntBASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Gm12428-201ENSMUST00000119844 727 ntBASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Gm24158-201ENSMUST00000175263 71 ntBASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Gm16476-201ENSMUST00000221544 139 ntBASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sgms1Q8VCQ6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sgms1Q8VCQ6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sgms1Q8VCQ6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sgms1Q8VCQ6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sgms1Q8VCQ6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sgms1Q8VCQ6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms