Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm11779-201ENSMUST00000118541 368 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm2810-201ENSMUST00000118681 990 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm12882-201ENSMUST00000121696 517 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm38225-201ENSMUST00000194001 393 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps39Q8R5L3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Rprl2-201ENSMUST00000157150 290 ntBASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Gm44771-201ENSMUST00000206975 626 ntBASIC14.18□□□□□ -0.14
Vps39Q8R5L3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps39Q8R5L3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Vps39Q8R5L3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms