Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm8749-201ENSMUST00000117737 331 ntBASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm15487-201ENSMUST00000122373 465 ntBASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdt1Q8R4E9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Syt7-204ENSMUST00000223586 1344 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdt1Q8R4E9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm2451-201ENSMUST00000199447 999 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm10290-201ENSMUST00000200451 999 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm45098-201ENSMUST00000207179 657 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms