Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atp2a1Q8R429 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Atp2a1Q8R429 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atp2a1Q8R429 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.81■□□□□ 0.12
Atp2a1Q8R429 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atp2a1Q8R429 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm37917-201ENSMUST00000194711 392 ntBASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Atp2a1Q8R429 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gm12134-201ENSMUST00000122109 520 ntBASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gm23984-201ENSMUST00000157139 203 ntBASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.79■□□□□ 0.12
Atp2a1Q8R429 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gm6745-201ENSMUST00000199216 526 ntBASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atp2a1Q8R429 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atp2a1Q8R429 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms