Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vcpip1Q8CDG3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.22■□□□□ 0.03
Vcpip1Q8CDG3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vcpip1Q8CDG3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vcpip1Q8CDG3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vcpip1Q8CDG3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms