Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lrif1Q8CDD9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Gm27702-201ENSMUST00000184512 56 ntBASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lrif1Q8CDD9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gm14042-201ENSMUST00000120139 833 ntBASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gm8584-201ENSMUST00000171982 758 ntBASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lrif1Q8CDD9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14□□□□□ -0.17
Lrif1Q8CDD9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14□□□□□ -0.17
Lrif1Q8CDD9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lrif1Q8CDD9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms