Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Gm9797-201ENSMUST00000052902 613 ntBASIC16.48■□□□□ 0.23
Alx1Q8C8B0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Alx1Q8C8B0 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm2423-201ENSMUST00000074863 733 ntBASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Alx1Q8C8B0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Mir698-201ENSMUST00000102164 109 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm2445-201ENSMUST00000182798 989 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm42612-201ENSMUST00000197986 623 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm43170-201ENSMUST00000199827 612 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm44855-201ENSMUST00000205725 362 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms