Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc60Q8C4J0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm8584-201ENSMUST00000171982 758 ntBASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc60Q8C4J0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Gm9063-201ENSMUST00000223299 582 ntBASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc60Q8C4J0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Gm27321-201ENSMUST00000185021 205 ntBASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Gm43703-201ENSMUST00000200523 763 ntBASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Gm7775-201ENSMUST00000218871 853 ntBASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc60Q8C4J0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms