Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska3Q8C263 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska3Q8C263 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska3Q8C263 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska3Q8C263 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska3Q8C263 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ska3Q8C263 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ska3Q8C263 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Matn2-206ENSMUST00000228570 2798 ntBASIC13.34□□□□□ -0.27
Ska3Q8C263 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.34□□□□□ -0.27
Ska3Q8C263 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ska3Q8C263 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ska3Q8C263 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ska3Q8C263 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ska3Q8C263 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ska3Q8C263 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ska3Q8C263 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.33□□□□□ -0.28
Ska3Q8C263 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Gm15920-201ENSMUST00000118998 402 ntBASIC13.33□□□□□ -0.28
Ska3Q8C263 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.33□□□□□ -0.28
Ska3Q8C263 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.33□□□□□ -0.28
Ska3Q8C263 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Ska3Q8C263 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ska3Q8C263 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ska3Q8C263 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ska3Q8C263 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ska3Q8C263 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm24543-201ENSMUST00000103867 82 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm27622-201ENSMUST00000183779 60 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.32□□□□□ -0.28
Ska3Q8C263 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.32□□□□□ -0.28
Ska3Q8C263 BC001981-202ENSMUST00000191393 1545 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.32□□□□□ -0.28
Ska3Q8C263 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.32□□□□□ -0.28
Ska3Q8C263 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ska3Q8C263 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms