Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gm25948-201ENSMUST00000175334 112 ntBASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Usp43Q8BUM9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp43Q8BUM9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp43Q8BUM9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp43Q8BUM9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp43Q8BUM9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Gm8410-201ENSMUST00000117225 605 ntBASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms