Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.7□□□□□ -0.22
Cpne3Q8BT60 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.7□□□□□ -0.22
Cpne3Q8BT60 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Mir3113-201ENSMUST00000175478 76 ntBASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Mir8117-201ENSMUST00000184773 107 ntBASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne3Q8BT60 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Gm15427-201ENSMUST00000117288 531 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Rpph1-201ENSMUST00000175096 319 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne3Q8BT60 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpne3Q8BT60 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms