Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Snora73a-201ENSMUST00000082453 205 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm12020-201ENSMUST00000119030 2042 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 AC162938.1-201ENSMUST00000213140 2323 ntBASIC19.79■□□□□ 0.76
Usp54Q8BL06 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp54Q8BL06 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Gm25927-201ENSMUST00000175058 117 ntBASIC19.78■□□□□ 0.76
Usp54Q8BL06 Gm27243-201ENSMUST00000183964 521 ntBASIC19.78■□□□□ 0.76
Usp54Q8BL06 Gm24526-201ENSMUST00000082921 158 ntBASIC19.78■□□□□ 0.76
Usp54Q8BL06 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.78■□□□□ 0.76
Usp54Q8BL06 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp54Q8BL06 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Gm26083-201ENSMUST00000157904 193 ntBASIC19.77■□□□□ 0.76
Usp54Q8BL06 Gm38266-201ENSMUST00000194931 421 ntBASIC19.77■□□□□ 0.76
Usp54Q8BL06 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.77■□□□□ 0.76
Usp54Q8BL06 CT573086.1-201ENSMUST00000227202 1074 ntBASIC19.77■□□□□ 0.76
Usp54Q8BL06 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp54Q8BL06 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp54Q8BL06 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp54Q8BL06 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp54Q8BL06 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Gm29396-201ENSMUST00000185659 716 ntBASIC19.76■□□□□ 0.75
Usp54Q8BL06 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Gm38341-201ENSMUST00000195357 515 ntBASIC19.76■□□□□ 0.75
Usp54Q8BL06 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp54Q8BL06 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms