Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Mir1938-201ENSMUST00000158746 100 ntBASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Gm19078-201ENSMUST00000206311 727 ntBASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcal1Q8BJL0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gm11524-201ENSMUST00000119349 807 ntBASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gm27772-201ENSMUST00000184900 187 ntBASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.03■□□□□ -0
Smarcal1Q8BJL0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcal1Q8BJL0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcal1Q8BJL0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm13385-201ENSMUST00000121089 220 ntBASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm2495-201ENSMUST00000191160 466 ntBASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm43630-201ENSMUST00000201550 776 ntBASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcal1Q8BJL0 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms